PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008244181.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 418aa    MW: 48454.3 Da    PI: 4.5365
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008244181.2genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1392.9e-43161462128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek...ewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     p GfrFhPt+eelv++yLk+k +++++++ ++i+e+di+k++Pw++p   ++++++   ew+fFs+rd ky +++r+nrat +g Wk tgk++ +
  XP_008244181.2  16 PLGFRFHPTEEELVDYYLKNKRQDRDFNV-NHIPEIDICKYDPWEIPgLLFAEQDSpymEWFFFSRRDYKYMNSNRSNRATPHGSWKITGKERMI 109
                     89***************************.88***************544444444577************************************ PP

             NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++ +++++g+k+t++fy+    k++kt+Wvmhey+l
  XP_008244181.2 110 RARgSNAVIGTKRTMTFYERGVLKSKKTNWVMHEYNL 146
                     **9666779*********9999999**********87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.32E-4813169IPR003441NAC domain
PROSITE profilePS5100546.13515170IPR003441NAC domain
PfamPF023653.4E-2516146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MGSKCYRKTT EGDPVPLGFR FHPTEEELVD YYLKNKRQDR DFNVNHIPEI DICKYDPWEI  60
PGLLFAEQDS PYMEWFFFSR RDYKYMNSNR SNRATPHGSW KITGKERMIR ARGSNAVIGT  120
KRTMTFYERG VLKSKKTNWV MHEYNLFESE ASPDPQLAER DFVLYRMKKN PDKKDTSVFA  180
EGEPSSYNWS NCEDQAAHVT PESQDHSPST LQSPAYIELG DVLQVNGFNG DCNDMQSPFG  240
DNDYSVTHKN DFSTFDEVAY DMSQELYAQQ DKNSYMLMPQ SPTFRNLEDF TYINASDFGN  300
QTANNMVLEQ AQDYHSFTLP SPIYSELGSV PHDDVYNNEW QSAYANFENQ TTDERISEEC  360
PQPKENLRSI LSASQLADYT SQSLMNTEEY QRRHCEIGIE GAAGMNWEGS FFNFPLKP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B4e-321517017165NAC domain-containing protein 19
4dul_A4e-321517017165NAC domain-containing protein 19
1ut7_B4e-321517017165NO APICAL MERISTEM PROTEIN
1ut7_A4e-321517017165NO APICAL MERISTEM PROTEIN
1ut4_B4e-321517017165NO APICAL MERISTEM PROTEIN
1ut4_A4e-321517017165NO APICAL MERISTEM PROTEIN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008244181.10.0PREDICTED: uncharacterized protein LOC103342338
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14450518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.15e-41NAC transcription factor-like 9